HalophFGD

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Basic Information
Locus ID: AH03.122
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: F-box domain
Maps and Mapping Data
Chromosome Start End Strand ID
AH03 1391096 1391881 + AH03.122
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.44 29,037.42 Da 54.06 92.68 -0.09
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 10 50 3.0E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 8 64 1.03E-11 IPR036047
Gene3D G3DSA:1.20.1280.50 - 6 47 6.8E-7 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_015647878.1 uncharacterized protein LOC4342293 [Oryza sativa Japonica Group] 3.66E-16
TrEMBL A0A4U6VL09 Nucleoporin_N domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G028832v2 PE=4 SV=1 1.65E-15
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 2 AH03.122, CH03.198
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.