Basic Information
Locus ID:
AH03.1159
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 15615333 | 15621083 | + | AH03.1159 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 172,542.84 Da | 42.19 | 80.10 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 330 | 601 | 4.04544E-108 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1304 | 1531 | 4.64258E-115 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1311 | 1475 | 3.1E-33 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 349 | 585 | 5.9E-27 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 396 | 567 | 1.86E-27 | IPR027409 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 351 | 584 | 8.55E-6 | IPR027410 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1305 | 1531 | 2.94E-68 | - |
| Gene3D | G3DSA:3.30.810.10 | - | 1393 | 1532 | 6.7E-41 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1264 | 1390 | 7.5E-23 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 394 | 567 | 3.6E-36 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1252 | 1532 | 3.8E-66 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1202 | 1531 | 49.057335 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 666 | 745 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 684 | 730 | - | - |
| Coils | Coil | Coil | 440 | 460 | - | - |
| Coils | Coil | Coil | 303 | 323 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 1.04E-226 |
| RefSeq | XP_025802000.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like isoform X1 [Panicum hallii] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 1.01E-225 | |
| TrEMBL | A0A2S3GY29 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Panicum hallii OX=206008 GN=PAHAL_2G139900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology