Basic Information
Locus ID:
AH03.1151
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 15442175 | 15451644 | + | AH03.1151 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.14 | 252,027.30 Da | 52.06 | 75.35 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02992 | Transposase family tnp2 | 322 | 535 | 5.8E-90 | IPR004242 |
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 2091 | 2148 | 8.0E-5 | IPR003653 |
| Pfam | PF13963 | Transposase-associated domain | 5 | 78 | 2.1E-18 | IPR029480 |
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 943 | 1008 | 9.0E-13 | IPR025312 |
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 719 | 825 | 3.0E-36 | IPR025452 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 2003 | 2163 | 8.05E-19 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 1980 | 2169 | 6.9E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1773 | 1794 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1892 | 1925 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1010 | 1030 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1813 | 1849 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1297 | 1317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1295 | 1326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1748 | 1849 | - | - |
| Coils | Coil | Coil | 1618 | 1638 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039778865.1 | uncharacterized protein LOC120646298 [Panicum virgatum] | 0 |
| TrEMBL | Q2QQL4 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g30630 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 46 | AH01.2619, AH01.3243, AH02.2591, AH02.744, AH03.1151 ... |
| Poaceae | Lolium multiflorum | 13 | gene-QYE76_005385, gene-QYE76_005912, gene-QYE76_006405 ... |