Basic Information
Locus ID:
AH03.1123
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
U-box domain-containing protein 33
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH03 | 14888943 | 14895363 | + | AH03.1123 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 94,584.12 Da | 45.50 | 82.64 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 98 | 217 | 2.18088E-27 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 783 | 823 | 3.43287E-21 | - |
| Pfam | PF04564 | U-box domain | 779 | 850 | 3.4E-18 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 500 | 753 | 6.0E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 480 | 754 | 5.46E-69 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 771 | 849 | 4.33E-23 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 91 | 201 | 2.18E-5 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 778 | 850 | 3.2E-26 | IPR013083 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 483 | 571 | 8.2E-28 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 68 | 209 | 2.9E-5 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 572 | 768 | 4.0E-49 | - |
| SMART | SM00504 | Ubox_2 | 782 | 845 | 7.9E-25 | IPR003613 |
| SMART | SM00220 | serkin_6 | 499 | 770 | 1.1E-30 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 778 | 850 | 27.644579 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 499 | 766 | 33.106789 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 617 | 629 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 249 | - | - |
| Coils | Coil | Coil | 115 | 135 | - | - |
| Coils | Coil | Coil | 408 | 470 | - | - |
| Coils | Coil | Coil | 356 | 387 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 1.77E-151 |
| RefSeq | XP_025804490.1 | U-box domain-containing protein 33-like [Panicum hallii] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 1.71E-150 | |
| TrEMBL | A0A2S3GXS0 | RING-type E3 ubiquitin transferase OS=Panicum hallii OX=206008 GN=PAHAL_2G133700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology