Basic Information
Locus ID:
AH02.744
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 7232572 | 7240259 | - | AH02.744 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 208,406.83 Da | 50.53 | 70.95 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 499 | 605 | 3.8E-36 | IPR025452 |
| Pfam | PF02992 | Transposase family tnp2 | 256 | 451 | 2.1E-72 | IPR004242 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 1707 | 1832 | 5.3E-17 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 1684 | 1836 | 5.7E-8 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 941 | 966 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1301 | 1322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1453 | 1470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1518 | 1565 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1477 | 1498 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 933 | 974 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1596 | 1629 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 838 | 859 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1301 | 1324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1451 | 1569 | - | - |
| Coils | Coil | Coil | 1252 | 1286 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039778865.1 | uncharacterized protein LOC120646298 [Panicum virgatum] | 0 |
| TrEMBL | Q2QQL4 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g30630 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 46 | AH01.2619, AH01.3243, AH02.2591, AH02.744, AH03.1151 ... |
| Poaceae | Lolium multiflorum | 13 | gene-QYE76_005385, gene-QYE76_005912, gene-QYE76_006405 ... |