Basic Information
Locus ID:
AH02.569
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 5584943 | 5587074 | + | AH02.569 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 54,262.89 Da | 55.56 | 67.46 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 462 | 504 | 6.9E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 454 | 505 | 1.67E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 441 | 507 | 3.0E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 463 | 503 | 3.5E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 463 | 504 | 12.858103 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37150.1 | RING/U-box superfamily protein. | 6.16E-30 |
| RefSeq | XP_014660725.1 | E3 ubiquitin-protein ligase MBR1 [Setaria italica] | 4.92E-296 |
| Q9ZQF9 | E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV=1 | 7.49E-27 | |
| TrEMBL | K3XGL7 | RING-type domain-containing protein OS=Setaria italica OX=4555 GN=101772851 PE=4 SV=1 | 1.11E-294 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology