Basic Information
Locus ID:
AH02.4672
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 61091451 | 61094492 | - | AH02.4672 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 111,472.57 Da | 49.90 | 55.82 | -1.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 219 | 305 | 4.07841E-29 | - |
| Pfam | PF00855 | PWWP domain | 219 | 304 | 2.1E-12 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 212 | 322 | 3.97E-23 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 207 | 312 | 1.1E-18 | - |
| SMART | SM00293 | PWWP_4 | 219 | 280 | 4.2E-5 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 221 | 282 | 12.192327 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 841 | 909 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 889 | 909 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 508 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 545 | 740 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 437 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 492 | 508 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 629 | 671 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 545 | 559 | - | - |
| Coils | Coil | Coil | 112 | 132 | - | - |
| Coils | Coil | Coil | 60 | 97 | - | - |
| Coils | Coil | Coil | 143 | 197 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09670.1 | Tudor/PWWP/MBT superfamily protein. | 4.37E-40 |
| RefSeq | XP_004971451.1 | uncharacterized protein LOC101776382 [Setaria italica] | 0 |
| Q9SF36 | PWWP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDP2 PE=1 SV=1 | 4.31E-39 | |
| TrEMBL | A0A1E5WHH4 | PWWP domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0002138 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology