Basic Information
Locus ID:
AH02.4242
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 57917403 | 57920781 | + | AH02.4242 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 38,744.37 Da | 51.25 | 81.54 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 139 | 182 | 0.00340016 | - |
| Pfam | PF02135 | TAZ zinc finger | 221 | 302 | 8.8E-11 | IPR000197 |
| Pfam | PF00651 | BTB/POZ domain | 30 | 133 | 6.7E-10 | IPR000210 |
| SUPERFAMILY | SSF57933 | TAZ domain | 213 | 310 | 2.22E-16 | IPR035898 |
| SUPERFAMILY | SSF54695 | POZ domain | 29 | 134 | 1.33E-10 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 139 | 211 | 1.1E-9 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 25 | 138 | 1.8E-17 | IPR011333 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 212 | 323 | 1.1E-16 | IPR035898 |
| SMART | SM00225 | BTB_4 | 30 | 138 | 5.6E-8 | IPR000210 |
| SMART | SM00551 | TAZ_2 | 214 | 303 | 1.0E-14 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 103 | 9.889041 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63160.1 | BTB and TAZ domain protein 1. BTB and TAZ domain protein. Short-lived nuclear-cytoplasmic protein targeted for degradation by the 26S proteosome pathway. Acts redundantly with BT2 and BT3 during female gametophyte development. | 5.52E-94 |
| RefSeq | XP_034594064.1 | BTB/POZ and TAZ domain-containing protein 1 [Setaria viridis] | 2.99E-225 |
| Q9FMK7 | BTB/POZ and TAZ domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BT1 PE=1 SV=1 | 5.32E-93 | |
| TrEMBL | A0A4U6UUN7 | BTB domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_5G426800v2 PE=4 SV=1 | 6.76E-224 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology