Basic Information
Locus ID:
AH02.40
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 739942 | 743029 | - | AH02.40 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 106,248.68 Da | 38.84 | 108.33 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 2.0E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 120 | 179 | 1.7E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 700 | 909 | 4.2E-42 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 270 | 590 | 2.51E-58 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 354 | 9.01E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 676 | 980 | 1.12E-70 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 311 | 2.5E-70 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 782 | 995 | 5.5E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 312 | 620 | 8.0E-82 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 667 | 781 | 1.1E-24 | - |
| SMART | SM00220 | serkin_6 | 699 | 961 | 2.5E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 699 | 984 | 35.73571 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 829 | 841 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 705 | 728 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 6.94E-131 |
| RefSeq | XP_039845692.1 | receptor-like protein kinase HSL1 [Panicum virgatum] | 2.04E-179 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 6.74E-130 | |
| TrEMBL | A0A3L6SPY7 | Receptor-like protein kinase HSL1 OS=Panicum miliaceum OX=4540 GN=C2845_PM07G40480 PE=3 SV=1 | 7.7E-179 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology