Basic Information
Locus ID:
AH02.3825
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 54382787 | 54384987 | - | AH02.3825 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 52,675.11 Da | 37.87 | 90.62 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 24 | 345 | 1.1E-78 | IPR000490 |
| Pfam | PF07983 | X8 domain | 365 | 436 | 1.1E-17 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 24 | 346 | 5.67E-85 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 23 | 352 | 4.4E-114 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 358 | 459 | 1.1E-9 | - |
| SMART | SM00768 | X8_cls | 364 | 449 | 8.5E-47 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 2.68E-210 |
| RefSeq | NP_001130376.1 | putative O-Glycosyl hydrolase superfamily protein precursor [Zea mays] | 7.54E-299 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 2.58E-209 | |
| TrEMBL | A0A1E5VPE5 | Glucan endo-1,3-beta-glucosidase 3 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0011972 PE=3 SV=1 | 8.21E-309 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology