Basic Information
Locus ID:
AH02.3683
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 53201587 | 53210543 | - | AH02.3683 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 114,990.62 Da | 44.30 | 97.02 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 732 | 998 | 3.56221E-90 | - |
| Pfam | PF13855 | Leucine rich repeat | 260 | 319 | 2.4E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 141 | 179 | 1.4E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 728 | 995 | 5.4E-47 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 152 | 491 | 4.25E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 711 | 1015 | 1.78E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 802 | 1007 | 5.2E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 699 | 801 | 4.6E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 402 | 490 | 3.8E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 293 | 401 | 2.9E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 292 | 4.3E-39 | IPR032675 |
| SMART | SM00220 | serkin_6 | 726 | 998 | 9.9E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 726 | 998 | 37.657936 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 846 | 858 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 732 | 754 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1035 | 1055 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 5.3E-255 |
| RefSeq | XP_012701538.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Setaria italica] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 5.11E-254 | |
| TrEMBL | K3XE91 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101766119 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology