Basic Information
Locus ID:
AH02.3680
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 53169237 | 53173400 | - | AH02.3680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 60,149.92 Da | 43.56 | 97.46 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 241 | 490 | 6.8E-36 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 11 | 94 | 5.35E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 240 | 514 | 1.78E-64 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 8 | 142 | 3.8E-12 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 246 | 307 | 2.0E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 308 | 503 | 4.9E-48 | - |
| SMART | SM00220 | serkin_6 | 240 | 495 | 1.1E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 240 | 495 | 29.700493 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 343 | 355 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 246 | 268 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 532 | 552 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 8.78E-144 |
| RefSeq | XP_022682574.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Setaria italica] | 8.47E-309 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 8.52E-143 | |
| TrEMBL | A0A2S3HR09 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_5G112700 PE=4 SV=1 | 2.21E-308 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology