Basic Information
Locus ID:
AH02.3664
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 53027882 | 53041293 | + | AH02.3664 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 196,920.44 Da | 36.96 | 92.97 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1489 | 1753 | 6.76434E-93 | - |
| CDD | cd14066 | STKc_IRAK | 627 | 894 | 4.8173E-92 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 624 | 891 | 1.6E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 59 | 1.9E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1486 | 1751 | 1.1E-46 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 373 | 1.24E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1469 | 1757 | 4.65E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 946 | 1251 | 9.52E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 607 | 908 | 7.55E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 595 | 696 | 4.5E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 397 | 9.5E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1132 | 1269 | 7.2E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 928 | 1035 | 1.2E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1455 | 1558 | 1.6E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 697 | 911 | 3.3E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1036 | 1131 | 5.4E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1559 | 1765 | 3.0E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 176 | 3.9E-40 | IPR032675 |
| SMART | SM00220 | serkin_6 | 621 | 894 | 3.9E-34 | IPR000719 |
| SMART | SM00220 | serkin_6 | 1483 | 1756 | 8.3E-34 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 1116 | 1138 | 7.634948 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 621 | 894 | 38.98653 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1483 | 1756 | 39.170273 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 741 | 753 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1602 | 1614 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1489 | 1511 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 627 | 649 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1771 | 1812 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1782 | 1800 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 1.25E-265 |
| RefSeq | XP_004970368.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Setaria italica] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 1.87E-219 | |
| TrEMBL | A0A1E5W6E7 | Putative leucine-rich repeat receptor-like protein kinase OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0006105 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology