Basic Information
Locus ID:
AH02.3438
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
HMT3
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 50932123 | 50936118 | - | AH02.3438 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 50,901.76 Da | 40.81 | 88.23 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 175 | 471 | 1.4E-75 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 170 | 474 | 9.94E-78 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 167 | 470 | 8.2E-99 | IPR036589 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 162 | 471 | 44.68578 | IPR003726 |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 5.47E-137 |
| RefSeq | XP_002458576.1 | homocysteine S-methyltransferase 4 [Sorghum bicolor] | 2.56E-193 |
| Q9FUM7 | Homocysteine S-methyltransferase 4 OS=Zea mays OX=4577 GN=HMT-4 PE=2 SV=1 | 3.22E-186 | |
| TrEMBL | A0A1D6NAB1 | Homocysteine S-methyltransferase4 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d043302 PE=4 SV=1 | 6.21E-184 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology