Basic Information
Locus ID:
AH02.3380
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 50311534 | 50317834 | - | AH02.3380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 78,780.10 Da | 48.17 | 74.77 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 596 | 710 | 8.6E-10 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 401 | 592 | 4.32E-23 | IPR029063 |
| SUPERFAMILY | SSF46934 | UBA-like | 209 | 249 | 8.71E-5 | IPR009060 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 595 | 710 | 2.61E-18 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 558 | 718 | 2.2E-27 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 206 | 252 | 6.3E-7 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 399 | 492 | 8.4E-6 | - |
| SMART | SM00165 | uba_6 | 211 | 249 | 2.6 | IPR015940 |
| SMART | SM00165 | uba_6 | 312 | 347 | 1.2 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 209 | 250 | 9.92031 | IPR015940 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 392 | 718 | 128.905243 | IPR030380 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 595 | 719 | 20.745018 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 171 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 2.69E-159 |
| RefSeq | XP_004986027.1 | DNA (cytosine-5)-methyltransferase DRM2 [Setaria italica] | 2.0500000035573E-316 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 2.31E-253 | |
| TrEMBL | K4A7C3 | SAM-dependent MTase DRM-type domain-containing protein OS=Setaria italica OX=4555 GN=101784586 PE=3 SV=1 | 4.6399999982909E-315 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology