Basic Information
Locus ID:
AH02.3333
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein FAR1-RELATED SEQUENCE
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 49867694 | 49872695 | + | AH02.3333 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 108,486.70 Da | 44.47 | 66.60 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03101 | FAR1 DNA-binding domain | 350 | 388 | 2.2E-6 | IPR004330 |
| Pfam | PF10551 | MULE transposase domain | 510 | 603 | 2.5E-23 | IPR018289 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 730 | 766 | 8.023589 | IPR007527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 127 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38180.1 | FAR1-related sequence 5. | 7.85E-60 |
| RefSeq | XP_051178927.1 | protein FAR1-RELATED SEQUENCE 5-like [Lolium perenne] | 3.99E-157 |
| Q9SZL8 | Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 | 7.71E-59 | |
| TrEMBL | A0A5J9T9P8 | SWIM-type domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_41348 PE=3 SV=1 | 1.99E-270 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology