Basic Information
Locus ID:
AH02.3139
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 47537864 | 47541164 | + | AH02.3139 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 113,055.51 Da | 38.86 | 98.34 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 720 | 1005 | 8.81899E-91 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 516 | 534 | 0.69 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 84 | 142 | 7.8E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 156 | 215 | 1.1E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 79 | 7.6E-4 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 584 | 599 | 1.9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 303 | 361 | 3.9E-10 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 717 | 953 | 8.1E-41 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 302 | 603 | 5.55E-54 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 83 | 364 | 2.47E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 711 | 1003 | 7.42E-69 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 195 | 7.9E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 298 | 1.5E-23 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 708 | 797 | 6.7E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 299 | 397 | 6.9E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 398 | 631 | 1.7E-57 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 798 | 1025 | 1.2E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 203 | 227 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 252 | 276 | 18.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 714 | 1004 | 2.1E-27 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 105 | 128 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 348 | 372 | 9.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 156 | 179 | 99.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 513 | 537 | 51.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 714 | 1004 | 35.255154 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 855 | 867 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 720 | 747 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 561 | 574 | 1.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 108 | 121 | 1.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 1.55E-93 |
| RefSeq | XP_025814243.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 3.97E-295 |
| O49545 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana OX=3702 GN=BAM1 PE=1 SV=1 | 7.58E-61 | |
| TrEMBL | A0A2T8IKA2 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_5G164200 PE=3 SV=1 | 8.98E-294 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology