Basic Information
Locus ID:
AH02.3138
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 47521209 | 47524507 | + | AH02.3138 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 112,445.20 Da | 40.68 | 94.62 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 291 | 351 | 6.5E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 99 | 156 | 1.4E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 706 | 993 | 3.5E-44 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 171 | 229 | 4.3E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 54 | 93 | 1.5E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 700 | 995 | 2.87E-71 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 338 | 606 | 9.81E-43 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 100 | 430 | 2.12E-65 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 168 | 232 | 4.0E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 55 | 167 | 3.6E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 787 | 1017 | 4.5E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 233 | 362 | 4.7E-34 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 699 | 786 | 4.4E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 363 | 619 | 2.7E-67 | IPR032675 |
| SMART | SM00220 | serkin_6 | 703 | 995 | 3.7E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 505 | 529 | 47.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 266 | 290 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 3.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 144 | 167 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 553 | 577 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 119 | 143 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 291 | 313 | 260.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 703 | 1005 | 37.474194 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 846 | 858 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 709 | 736 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 553 | 566 | 2.2E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 146 | 159 | 2.2E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1004 | 1049 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 3.75E-106 |
| RefSeq | XP_034593991.1 | receptor-like protein kinase HSL1 isoform X1 [Setaria viridis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 3.31E-67 | |
| TrEMBL | A0A2T7DH02 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_5G164900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology