Basic Information
Locus ID:
AH02.2941
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CBL10
Description:
EF hand
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 45548207 | 45553160 | + | AH02.2941 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 53,423.99 Da | 64.52 | 99.38 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 190 | 259 | 3.02549E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 189 | 258 | 1.4E-9 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 109 | 273 | 1.26E-39 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 102 | 296 | 9.0E-55 | - |
| SMART | SM00054 | efh_1 | 234 | 262 | 0.15 | IPR002048 |
| SMART | SM00054 | efh_1 | 153 | 181 | 1.6 | IPR002048 |
| SMART | SM00054 | efh_1 | 190 | 218 | 4.5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 149 | 184 | 10.608049 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 186 | 221 | 11.02648 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 230 | 265 | 10.635944 | IPR002048 |
| PRINTS | PR00450 | Recoverin family signature | 204 | 222 | 9.7E-6 | - |
| PRINTS | PR00450 | Recoverin family signature | 157 | 178 | 9.7E-6 | - |
| PRINTS | PR00450 | Recoverin family signature | 250 | 270 | 9.7E-6 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33000.1 | calcineurin B-like protein 10. Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis. | 2.06E-88 |
| RefSeq | XP_039848762.1 | calcineurin B-like protein 10 [Panicum virgatum] | 5.45E-138 |
| Q3HRN7 | Calcineurin B-like protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL10 PE=2 SV=1 | 9.98E-131 | |
| TrEMBL | A0A8T0SSQ5 | Calcineurin B-like protein OS=Panicum virgatum OX=38727 GN=PVAP13_5KG480700 PE=3 SV=1 | 1.23E-136 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology