Basic Information
Locus ID:
AH02.2773
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 43483746 | 43494807 | - | AH02.2773 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 214,368.81 Da | 43.83 | 73.65 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 77 | 485 | 2.1E-174 | IPR002554 |
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 656 | 908 | 1.1E-111 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 87 | 467 | 3.74E-148 | IPR016024 |
| SUPERFAMILY | SSF48371 | ARM repeat | 653 | 909 | 8.63E-98 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 82 | 484 | 2.1E-175 | IPR011989 |
| Gene3D | G3DSA:1.25.10.10 | - | 652 | 915 | 3.2E-113 | IPR011989 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1918 | 1938 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1664 | 1704 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1664 | 1693 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1409 | 1427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1324 | 1371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1262 | 1285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1912 | 1938 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1245 | 1427 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25510.1 | Protein phosphatase 2A regulatory B subunit family protein. | 1.09E-224 |
| RefSeq | XP_012701954.1 | serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform [Setaria italica] | 0 |
| Q6I621 | Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform OS=Oryza sativa subsp. japonica OX=39947 GN=B'KAPPA PE=1 SV=1 | 3.34E-269 | |
| TrEMBL | K3XGX4 | Serine/threonine protein phosphatase 2A regulatory subunit OS=Setaria italica OX=4555 GN=101752870 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology