Basic Information
Locus ID:
AH02.2462
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
EBF1
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 39822555 | 39825394 | - | AH02.2462 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.87 | 37,108.24 Da | 42.25 | 83.51 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 107 | 306 | 1.16E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 170 | 247 | 8.0E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 248 | 318 | 3.3E-5 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 103 | 167 | 1.3E-6 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 203 | 238 | 97.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 110 | 135 | 7.1 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 283 | 308 | 0.023 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 177 | 202 | 580.0 | IPR006553 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 92 | - | - |
| Coils | Coil | Coil | 222 | 242 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 9.06E-31 |
| RefSeq | XP_003563656.1 | EIN3-binding F-box protein 1 [Brachypodium distachyon] | 2.79E-70 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 8.98E-30 | |
| TrEMBL | A0A5J9TAW7 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_41495 PE=4 SV=1 | 1.05E-77 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology