Basic Information
Locus ID:
AH02.2349
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 38226778 | 38227065 | + | AH02.2349 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.03 | 10,098.39 Da | 46.27 | 66.00 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 33 | 84 | 6.15E-10 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 33 | 95 | 2.7E-10 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 95 | 8.683236 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 46 | 69 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025803364.1 | putative cyclin-dependent kinase F-2 [Panicum hallii] | 3.15E-35 |
| TrEMBL | A0A3L6TFH9 | Putative cyclin-dependent kinase F-2 OS=Panicum miliaceum OX=4540 GN=C2845_PM03G29700 PE=4 SV=1 | 4.02E-36 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH02.2349 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr19G014040 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g25664 |