Basic Information
Locus ID:
AH02.2233
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
phosphatase 2A 55 kDa regulatory subunit B'
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 36818126 | 36825425 | + | AH02.2233 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 56,878.94 Da | 54.56 | 73.47 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 225 | 261 | 0.16 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 55 | 505 | 1.42E-36 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 208 | 507 | 4.5E-20 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 52 | 200 | 1.6E-7 | IPR015943 |
| SMART | SM00320 | WD40_4 | 319 | 369 | 97.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 272 | 312 | 24.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 120 | 160 | 9.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 47 | 82 | 4.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 222 | 261 | 0.79 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 26 | 513 | 5.9E-202 | IPR000009 |
| ProSitePatterns | PS01025 | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 231 | 245 | - | IPR018067 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 120 | 134 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 61 | 81 | 1.4E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 374 | 399 | 1.4E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 318 | 345 | 1.4E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 400 | 426 | 1.4E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 289 | 317 | 1.4E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 346 | 373 | 1.4E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 482 | 511 | 1.4E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 107 | 135 | 1.4E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 233 | 260 | 1.4E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 261 | 288 | 1.4E-155 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 136 | 164 | 1.4E-155 | IPR000009 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.2 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 4.45E-278 |
| RefSeq | XP_021313038.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2 [Sorghum bicolor] | 0 |
| A2X2K3 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Oryza sativa subsp. indica OX=39946 GN=OsI_006296 PE=2 SV=2 | 1.77E-275 | |
| TrEMBL | A0A811PEW6 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS25353 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology