Basic Information
Locus ID:
AH02.218
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 2245908 | 2252596 | - | AH02.218 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 73,362.15 Da | 40.96 | 85.33 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01789 | PsbP | 136 | 177 | 1.5E-5 | IPR002683 |
| Pfam | PF00069 | Protein kinase domain | 360 | 650 | 1.0E-67 | IPR000719 |
| SUPERFAMILY | SSF55724 | Mog1p/PsbP-like | 96 | 177 | 1.94E-7 | IPR016123 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 355 | 654 | 6.07E-94 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 356 | 446 | 5.3E-30 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 3 | 73 | 5.7E-16 | IPR027417 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 657 | 9.5E-67 | - |
| SMART | SM00220 | serkin_6 | 360 | 650 | 1.6E-93 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 360 | 650 | 45.968727 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 487 | 499 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 366 | 389 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20930.1 | cyclin-dependent kinase B2;2. Cyclin-dependent kinase, expressed in flowers and suspension cell culture, expression peaks during M phase in synchronized cultures. Required for proper organization of the shoot apical meristem and for hormone signaling. Expressed in the shoot apical meristem. Involved in regulation of the G2/M transition of the mitotic cell cycle. | 4.73E-173 |
| RefSeq | XP_025821922.1 | cyclin-dependent kinase B2-1 [Panicum hallii] | 6.06E-230 |
| Q0J4I1 | Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKB2-1 PE=1 SV=1 | 1.71E-202 | |
| TrEMBL | K3XWZ5 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=3 SV=1 | 1.64E-241 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for AH02.218.