Basic Information
Locus ID:
AH02.2141
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 35525758 | 35535326 | + | AH02.2141 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 110,540.93 Da | 38.76 | 89.89 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02736 | Myosin N-terminal SH3-like domain | 464 | 498 | 3.6E-9 | IPR004009 |
| Pfam | PF00063 | Myosin head (motor domain) | 776 | 958 | 2.4E-70 | IPR001609 |
| Pfam | PF00069 | Protein kinase domain | 38 | 252 | 1.5E-46 | IPR000719 |
| Pfam | PF00063 | Myosin head (motor domain) | 518 | 606 | 1.3E-29 | IPR001609 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 486 | 971 | 3.45E-177 | IPR027417 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 311 | 381 | 8.42E-8 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 254 | 2.16E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 130 | 296 | 2.1E-41 | - |
| Gene3D | G3DSA:1.20.58.530 | - | 805 | 959 | 1.3E-68 | - |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 465 | 606 | 1.8E-44 | IPR036961 |
| Gene3D | G3DSA:1.10.10.820 | - | 665 | 723 | 8.1E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 301 | 384 | 6.6E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 6 | 109 | 1.1E-23 | - |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 784 | 804 | 1.3E-68 | IPR036961 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 607 | 664 | 8.1E-63 | IPR036961 |
| Gene3D | G3DSA:1.20.120.720 | Myosin VI head, motor domain, U50 subdomain | 725 | 774 | 8.1E-63 | - |
| SMART | SM00220 | serkin_6 | 37 | 317 | 1.2E-33 | IPR000719 |
| SMART | SM00242 | MYSc_2a | 510 | 973 | 1.4E-163 | IPR001609 |
| ProSiteProfiles | PS51844 | Myosin N-terminal SH3-like domain profile. | 461 | 510 | 16.18536 | IPR004009 |
| ProSiteProfiles | PS51456 | Myosin motor domain profile. | 515 | 974 | 184.480713 | IPR001609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 443 | 37.120842 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 332 | 359 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 68 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 170 | 182 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54560.2 | - | 2.59E-255 |
| RefSeq | XP_034597242.1 | myosin-17-like isoform X2 [Setaria viridis] | 4.07E-310 |
| F4HWY6 | Myosin-11 OS=Arabidopsis thaliana OX=3702 GN=XI-E PE=3 SV=1 | 2.71E-254 | |
| TrEMBL | A0A8T0SJC9 | Myosin-17-like OS=Panicum virgatum OX=38727 GN=PVAP13_5KG403900 PE=3 SV=1 | 7.1799999997703E-314 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g033730 |
| Amaranthaceae | Suaeda glauca | 6 | Sgl21469, Sgl32083, Sgl32764, Sgl38048, Sgl47658, Sgl73332 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000046696 |
| Apiaceae | Apium graveolens | 1 | Ag10G00690 |
| Arecaceae | Cocos nucifera | 1 | COCNU_13G001510 |
| Brassicaceae | Brassica nigra | 2 | BniB05g004830.2N, BniB06g055190.2N |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g23920 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00013377 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G18016 |
| Poaceae | Echinochloa crus-galli | 2 | AH02.2141, BH01.50 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_009586, gene-QYE76_028916 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr05G022250, Chr0G030460, Chr12G037710, Chr13G016450 |
| Poaceae | Zea mays | 1 | Zm00001eb343050_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-15709, nbis-gene-16142, nbis-gene-29400 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG15.968, evm.TU.LG16.1283, evm.TU.LG20.1277 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_9_RagTag.974 |
| Rhizophoraceae | Carallia pectinifolia | 4 | nbisL1-mrna-21221, nbisL1-mrna-26239, nbisL1-mrna-27601 ... |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7005 |
| Rhizophoraceae | Ceriops zippeliana | 4 | nbisL1-mrna-10312, nbisL1-mrna-18336, nbisL1-mrna-7266 ... |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000003l.481 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00009784 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-5074, nbisL1-mrna-5075 |
| Salicaceae | Populus euphratica | 2 | populus_peu11888, populus_peu37973 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132635994 |