HalophFGD

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Basic Information
Locus ID: AH02.2127
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: Universal stress protein family
Maps and Mapping Data
Chromosome Start End Strand ID
AH02 35327831 35334809 + AH02.2127
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.53 141,150.56 Da 52.38 81.04 -0.31
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd01989 STK_N 557 699 6.71203E-48 -
Pfam PF05834 Lycopene cyclase protein 120 432 1.2E-125 -
Pfam PF00582 Universal stress protein family 556 667 4.1E-7 IPR006016
Pfam PF00069 Protein kinase domain 987 1240 1.1E-38 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 967 1244 2.56E-68 IPR011009
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain 119 431 9.08E-23 IPR036188
SUPERFAMILY SSF52402 Adenine nucleotide alpha hydrolases-like 555 674 2.76E-10 -
Gene3D G3DSA:3.40.50.620 HUPs 554 685 1.6E-9 IPR014729
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 963 1057 1.4E-25 -
Gene3D G3DSA:3.50.50.60 - 118 437 6.6E-17 IPR036188
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1058 1259 2.4E-46 -
SMART SM00220 serkin_6 985 1248 1.3E-27 IPR000719
TIGRFAM TIGR01790 carotene-cycl: lycopene cyclase family protein 120 422 9.0E-108 IPR010108
ProSiteProfiles PS50011 Protein kinase domain profile. 985 1248 35.834648 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 1103 1115 - IPR008271
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 120 142 5.3E-5 -
PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 250 259 5.3E-5 -
MobiDBLite mobidb-lite consensus disorder prediction 730 758 - -
MobiDBLite mobidb-lite consensus disorder prediction 454 484 - -
MobiDBLite mobidb-lite consensus disorder prediction 1274 1295 - -
Coils Coil Coil 851 871 - -
Coils Coil Coil 897 931 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation) GO:0016117 (carotenoid biosynthetic process)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding) GO:0016705 (oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G12000.1 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. 7.21E-239
RefSeq XP_022682778.1 U-box domain-containing protein 35 [Setaria italica] 0
Swiss-Prot Q38932 Lycopene epsilon cyclase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LUT2 PE=1 SV=2 1.88E-178
TrEMBL A0A1D6FXS3 Lycopene epsilon cyclase1 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d011210 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 1 jg31730
Aizoaceae Mesembryanthemum crystallinum 1 gene_9353
Amaranthaceae Atriplex hortensis 1 Ah015194
Amaranthaceae Salicornia bigelovii 3 Sbi_jg24602, Sbi_jg8459, Sbi_jg8461
Amaranthaceae Salicornia europaea 2 Seu_jg13409, Seu_jg28725
Amaranthaceae Suaeda aralocaspica 1 GOSA_00014731
Amaranthaceae Suaeda glauca 2 Sgl42897, Sgl47689
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000011696, gene:ENSEOMG00000032821 ...
gene:ENSEOMG00000046834
Amaranthaceae Chenopodium quinoa 3 CQ.Regalona.r1.8AG0014930, CQ.Regalona.r1.8BG0016280 ...
CQ.Regalona.r1.8BG0023620
Anacardiaceae Pistacia vera 1 pistato.v30259630
Apiaceae Apium graveolens 1 Ag8G00262
Arecaceae Cocos nucifera 1 scaffold011582G000050
Arecaceae Phoenix dactylifera 1 gene-LOC103723715
Asparagaceae Asparagus officinalis 1 AsparagusV1_03.2962.V1.1
Asteraceae Flaveria trinervia 1 Ftri14G12895
Brassicaceae Arabidopsis thaliana 1 AT5G57030.1
Brassicaceae Eutrema salsugineum 1 Thhalv10013234m.g.v1.0
Brassicaceae Schrenkiella parvula 1 Sp6g18740.v2.2
Brassicaceae Brassica nigra 2 BniB02g036220.2N, BniB08g014050.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq06G0832
Casuarinaceae Casuarina glauca 1 Cgl06G0858
Cymodoceaceae Cymodocea nodosa 1 gene.Cymno12g01010
Dunaliellaceae Dunaliella salina 2 Dusal.0472s00012.v1.0, Dusal.0598s00001.v1.0
Hydrocharitaceae Thalassia testudinum 1 gene.Thate09g14300
Nitrariaceae Nitraria sibirica 1 evm.TU.LG07.1264
Plantaginaceae Plantago ovata 1 Pov_00004091
Plumbaginaceae Limonium bicolor 1 Lb3G16948
Poaceae Echinochloa crus-galli 3 AH02.2127, BH02.2198, CH02.2350
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_1AG0021950, gene-QOZ80_1BG0071910
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.3HG0267830.1
Poaceae Lolium multiflorum 1 gene-QYE76_053469
Poaceae Oryza coarctata 2 Oco01G013230, Oco02G013380
Poaceae Oryza sativa 1 LOC_Os01g39960.1
Poaceae Paspalum vaginatum 1 gene-BS78_03G173800
Poaceae Puccinellia tenuiflora 2 Pt_Chr0603119, Pt_Chr0603126
Poaceae Sporobolus alterniflorus 3 Chr03G009600, Chr05G017030, Chr08G009950
Poaceae Thinopyrum elongatum 1 Tel3E01G362900
Poaceae Triticum aestivum 3 TraesCS3A02G208800.1, TraesCS3B02G239100.1 ...
TraesCS3D02G211700.1
Poaceae Zea mays 1 Zm00001eb357090_P001
Poaceae Zoysia japonica 1 nbis-gene-29416
Poaceae Zoysia macrostachya 1 Zma_g8113
Portulacaceae Portulaca oleracea 2 evm.TU.LG02.2348, evm.TU.LG23.581
Posidoniaceae Posidonia oceanica 1 gene.Posoc09g10300
Rhizophoraceae Bruguiera sexangula 1 evm.TU.Scaffold_4_RagTag.1816
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-25761
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-20185
Rhizophoraceae Ceriops zippeliana 1 nbisL1-mrna-4608
Rhizophoraceae Kandelia candel 1 evm.TU.utg000008l.1024
Rhizophoraceae Kandelia obovata 1 Maker00000239
Rhizophoraceae Rhizophora apiculata 1 nbisL1-mrna-14860
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-1113
Salicaceae Populus euphratica 1 populus_peu11913
Solanaceae Lycium barbarum 1 gene-LOC132636893
Solanaceae Solanum chilense 1 SOLCI004414300
Solanaceae Solanum pennellii 1 gene-LOC107007293
Tamaricaceae Reaumuria soongarica 1 gene_17640
Tamaricaceae Tamarix chinensis 1 TC10G1794
Zosteraceae Zostera marina 1 Zosma01g03320.v3.1
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