Basic Information
Locus ID:
AH02.2127
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Universal stress protein family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 35327831 | 35334809 | + | AH02.2127 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 141,150.56 Da | 52.38 | 81.04 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 557 | 699 | 6.71203E-48 | - |
| Pfam | PF05834 | Lycopene cyclase protein | 120 | 432 | 1.2E-125 | - |
| Pfam | PF00582 | Universal stress protein family | 556 | 667 | 4.1E-7 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 987 | 1240 | 1.1E-38 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 967 | 1244 | 2.56E-68 | IPR011009 |
| SUPERFAMILY | SSF51905 | FAD/NAD(P)-binding domain | 119 | 431 | 9.08E-23 | IPR036188 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 555 | 674 | 2.76E-10 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 554 | 685 | 1.6E-9 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 963 | 1057 | 1.4E-25 | - |
| Gene3D | G3DSA:3.50.50.60 | - | 118 | 437 | 6.6E-17 | IPR036188 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1058 | 1259 | 2.4E-46 | - |
| SMART | SM00220 | serkin_6 | 985 | 1248 | 1.3E-27 | IPR000719 |
| TIGRFAM | TIGR01790 | carotene-cycl: lycopene cyclase family protein | 120 | 422 | 9.0E-108 | IPR010108 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 985 | 1248 | 35.834648 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1103 | 1115 | - | IPR008271 |
| PRINTS | PR00411 | Pyridine nucleotide disulphide reductase class-I signature | 120 | 142 | 5.3E-5 | - |
| PRINTS | PR00411 | Pyridine nucleotide disulphide reductase class-I signature | 250 | 259 | 5.3E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 730 | 758 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1274 | 1295 | - | - |
| Coils | Coil | Coil | 851 | 871 | - | - |
| Coils | Coil | Coil | 897 | 931 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 7.21E-239 |
| RefSeq | XP_022682778.1 | U-box domain-containing protein 35 [Setaria italica] | 0 |
| Q38932 | Lycopene epsilon cyclase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LUT2 PE=1 SV=2 | 1.88E-178 | |
| TrEMBL | A0A1D6FXS3 | Lycopene epsilon cyclase1 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d011210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg31730 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_9353 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah015194 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg24602, Sbi_jg8459, Sbi_jg8461 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg13409, Seu_jg28725 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00014731 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl42897, Sgl47689 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000011696, gene:ENSEOMG00000032821 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.8AG0014930, CQ.Regalona.r1.8BG0016280 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30259630 |
| Apiaceae | Apium graveolens | 1 | Ag8G00262 |
| Arecaceae | Cocos nucifera | 1 | scaffold011582G000050 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103723715 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.2962.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri14G12895 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G57030.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10013234m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g18740.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g036220.2N, BniB08g014050.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G0832 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0858 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno12g01010 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0472s00012.v1.0, Dusal.0598s00001.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g14300 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.1264 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00004091 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G16948 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.2127, BH02.2198, CH02.2350 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0021950, gene-QOZ80_1BG0071910 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0267830.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_053469 |
| Poaceae | Oryza coarctata | 2 | Oco01G013230, Oco02G013380 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g39960.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G173800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0603119, Pt_Chr0603126 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr03G009600, Chr05G017030, Chr08G009950 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G362900 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G208800.1, TraesCS3B02G239100.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb357090_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-29416 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g8113 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.2348, evm.TU.LG23.581 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g10300 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.1816 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-25761 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-20185 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-4608 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000008l.1024 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00000239 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-14860 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-1113 |
| Salicaceae | Populus euphratica | 1 | populus_peu11913 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132636893 |
| Solanaceae | Solanum chilense | 1 | SOLCI004414300 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107007293 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_17640 |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G1794 |
| Zosteraceae | Zostera marina | 1 | Zosma01g03320.v3.1 |