Basic Information
Locus ID:
AH02.211
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 2173395 | 2178509 | + | AH02.211 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.76 | 41,933.14 Da | 63.10 | 71.85 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 295 | 318 | 1.55E-5 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 197 | 319 | 4.1E-6 | IPR013083 |
| Coils | Coil | Coil | 224 | 244 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025815759.1 | RING-H2 finger protein ATL39-like [Panicum hallii] | 1.96E-37 |
| TrEMBL | A0A3L6QYU2 | Putative RING zinc finger domain superfamily protein OS=Panicum miliaceum OX=4540 GN=C2845_PM08G01700 PE=4 SV=1 | 4.12E-37 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||