Basic Information
Locus ID:
AH02.2106
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 35073034 | 35076893 | - | AH02.2106 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 84,311.99 Da | 43.36 | 93.04 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 249 | 309 | 1.0E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 131 | 174 | 6.6E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 558 | 809 | 1.0E-31 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 138 | 341 | 1.51E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 518 | 809 | 2.6E-48 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 132 | 246 | 6.2E-22 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 619 | 812 | 1.4E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 250 | 363 | 3.3E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 510 | 617 | 2.9E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 535 | 812 | 26.661684 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 103 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 3.48E-112 |
| RefSeq | XP_004969430.1 | LRR receptor kinase SERK2 [Setaria italica] | 2.74E-281 |
| Q6K4T4 | LRR receptor kinase SERK2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERK4 PE=3 SV=1 | 9.62E-40 | |
| TrEMBL | K3XF53 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101770040 PE=4 SV=1 | 6.21E-280 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology