Basic Information
Locus ID:
AH02.2073
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 34553275 | 34562841 | - | AH02.2073 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 84,580.99 Da | 43.83 | 86.93 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 359 | 628 | 1.94743E-87 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 41 | 141 | 2.4E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 167 | 264 | 3.7E-10 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 353 | 626 | 1.9E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 333 | 632 | 3.51E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 312 | 427 | 4.8E-34 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 34 | 144 | 1.9E-12 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 428 | 641 | 1.2E-53 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 154 | 267 | 2.4E-19 | IPR038408 |
| SMART | SM00220 | serkin_6 | 353 | 630 | 1.3E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 353 | 630 | 36.654423 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 36 | 145 | 14.569805 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 151 | 267 | 16.271601 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 475 | 487 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 686 | 713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 692 | 711 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 9.98E-113 |
| RefSeq | XP_021311905.1 | cysteine-rich receptor-like protein kinase 25 [Sorghum bicolor] | 1.72E-217 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 9.67E-112 | |
| TrEMBL | A0A835E7U1 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_050292 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH02.2073, CH02.2296, CH07.185 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0627900.1 |
| Poaceae | Oryza coarctata | 2 | Oco01G009710, Oco02G010060 |
| Poaceae | Oryza sativa | 3 | LOC_Os01g23970.1, LOC_Os01g38850.1, LOC_Os01g38910.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G157100 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr02G017310, Chr03G009290, Chr05G016650 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G685700 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC6AG056390, gene_TRIDC6AG056400 ... |
| Poaceae | Triticum aestivum | 9 | TraesCS3B02G231200.1, TraesCS6A02G378900.1 ... |
| Poaceae | Zoysia japonica | 6 | nbis-gene-21510, nbis-gene-29462, nbis-gene-29465 ... |
| Poaceae | Zoysia macrostachya | 5 | Zma_g10423, Zma_g7034, Zma_g8087, Zma_g8088, Zma_g8089 |