Basic Information
Locus ID:
AH02.1701
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
von Willebrand factor (vWF) type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH02 | 22275266 | 22280418 | + | AH02.1701 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 80,158.33 Da | 63.16 | 70.21 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 714 | 760 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 740 | 760 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 610 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 198 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039819591.1 | E3 ubiquitin-protein ligase WAV3-like [Panicum virgatum] | 2.4E-46 |
| TrEMBL | A0A8T0Q2J4 | Zinc finger family protein OS=Panicum virgatum OX=38727 GN=PVAP13_7NG085000 PE=4 SV=1 | 2.72E-45 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 11 | AH02.1701, AH03.1663, AH03.1891, AH05.2284, AH08.1290 ... |
| Poaceae | Zea mays | 2 | Zm00001eb109200_P001, Zm00001eb273310_P001 |