Basic Information
Locus ID:
AH01.999
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CPK30
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 8532921 | 8535937 | - | AH01.999 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 62,695.66 Da | 40.53 | 79.84 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 398 | 457 | 1.17486E-16 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 91 | 349 | 2.64819E-122 | - |
| CDD | cd00051 | EFh | 469 | 531 | 1.60662E-17 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 396 | 458 | 1.6E-11 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 469 | 531 | 7.9E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 92 | 350 | 4.1E-70 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 374 | 543 | 2.93E-42 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 88 | 358 | 3.24E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 94 | 177 | 5.9E-25 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 360 | 533 | 8.6E-53 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 178 | 359 | 4.4E-60 | - |
| SMART | SM00054 | efh_1 | 505 | 533 | 1.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 397 | 425 | 3.5E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 433 | 461 | 0.07 | IPR002048 |
| SMART | SM00054 | efh_1 | 469 | 497 | 0.71 | IPR002048 |
| SMART | SM00220 | serkin_6 | 92 | 350 | 3.7E-95 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 393 | 428 | 15.461849 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 465 | 500 | 12.05861 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 429 | 464 | 10.078037 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 501 | 536 | 14.5413 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 92 | 350 | 47.481064 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 212 | 224 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 514 | 526 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 406 | 418 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 98 | 121 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 478 | 490 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 442 | 454 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 56 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G74740.1 | calcium-dependent protein kinase 30. member of Calcium Dependent Protein Kinase | 1.59E-259 |
| RefSeq | XP_012704248.1 | calcium-dependent protein kinase 9 [Setaria italica] | 0 |
| Q6AVI8 | Calcium-dependent protein kinase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK9 PE=2 SV=1 | 0 | |
| TrEMBL | K4A7J1 | Calcium-dependent protein kinase 30 OS=Setaria italica OX=4555 GN=101779715 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology