Basic Information
Locus ID:
AH01.843
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 6756693 | 6759480 | + | AH01.843 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 71,878.97 Da | 48.53 | 91.39 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 396 | 659 | 2.09839E-86 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 75 | 6.7E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 393 | 653 | 1.5E-37 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 129 | 187 | 7.0E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 394 | 656 | 6.15E-56 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 219 | 5.22E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 226 | 5.6E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 366 | 464 | 9.4E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 465 | 684 | 8.8E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 146 | 4.0E-21 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 390 | 659 | 31.679253 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 396 | 418 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 665 | 689 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 279 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 9.13E-157 |
| RefSeq | XP_025795235.1 | probable inactive receptor kinase RLK902 [Panicum hallii] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 8.8E-156 | |
| TrEMBL | A0A2S3IJD9 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G116300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology