Basic Information
Locus ID:
AH01.814
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 6443356 | 6447160 | + | AH01.814 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 102,851.64 Da | 38.53 | 87.29 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 619 | 891 | 5.5541E-94 | - |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 412 | 451 | 3.9E-6 | IPR025875 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 616 | 844 | 9.6E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 590 | 900 | 8.05E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 80 | 452 | 1.07E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 347 | 473 | 1.9E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 341 | 1.6E-71 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 575 | 690 | 2.5E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 691 | 909 | 2.0E-56 | - |
| SMART | SM00369 | LRR_typ_2 | 255 | 277 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 156 | 181 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 133 | 155 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 205 | 228 | 64.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 278 | 302 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 613 | 899 | 3.5E-45 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 434 | 458 | 71.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 410 | 433 | 290.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 613 | 894 | 41.092499 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 738 | 750 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 619 | 641 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 947 | 968 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 1.26E-304 |
| RefSeq | XP_004981977.1 | receptor protein kinase TMK1 [Setaria italica] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 1.21E-303 | |
| TrEMBL | K4A5E7 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101782673 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology