Basic Information
Locus ID:
AH01.59
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 608581 | 612639 | - | AH01.59 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.99 | 93,147.14 Da | 49.84 | 79.81 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 498 | 694 | 4.8E-18 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 259 | 275 | 1.7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 115 | 149 | 2.4E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 472 | 768 | 1.22E-39 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 132 | 328 | 1.28E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 565 | 793 | 1.1E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 113 | 349 | 4.6E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 472 | 564 | 7.8E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 492 | 773 | 20.541662 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 827 | 855 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 468 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 390 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 810 | 863 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 386 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16250.1 | Leucine-rich repeat protein kinase family protein. | 1.07E-115 |
| RefSeq | XP_022679188.1 | probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Setaria italica] | 0 |
| C0LGK4 | Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana OX=3702 GN=At2g16250 PE=1 SV=1 | 1.04E-114 | |
| TrEMBL | K4A5X1 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology