Basic Information
Locus ID:
AH01.5283
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 65085811 | 65089038 | - | AH01.5283 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 109,515.22 Da | 33.08 | 101.73 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 720 | 999 | 1.5E-41 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 535 | 594 | 2.9E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 75 | 2.0E-12 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 715 | 1002 | 9.02E-68 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 262 | 600 | 1.26E-70 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 80 | 355 | 3.06E-56 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 806 | 1025 | 7.1E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 149 | 5.1E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 708 | 805 | 5.8E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 150 | 220 | 1.1E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 389 | 630 | 3.1E-69 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 221 | 388 | 1.6E-55 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 557 | 581 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 437 | 461 | 58.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 718 | 1002 | 2.0E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 341 | 365 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 221 | 7.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 293 | 317 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 462 | 485 | 230.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 718 | 1009 | 36.400009 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 852 | 864 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 724 | 748 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 4.11E-169 |
| RefSeq | XP_034575566.1 | MDIS1-interacting receptor like kinase 1-like [Setaria viridis] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 3.98E-168 | |
| TrEMBL | A0A4U6T8P3 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G546800v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology