Basic Information
Locus ID:
AH01.5179
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Cation transporter/ATPase, N-terminus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 64358256 | 64363776 | + | AH01.5179 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 151,578.45 Da | 45.96 | 93.48 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13966 | zinc-binding in reverse transcriptase | 1222 | 1306 | 3.1E-24 | IPR026960 |
| Pfam | PF00122 | E1-E2 ATPase | 61 | 121 | 9.2E-14 | - |
| Pfam | PF00702 | haloacid dehalogenase-like hydrolase | 251 | 529 | 1.5E-16 | - |
| SUPERFAMILY | SSF81665 | Calcium ATPase, transmembrane domain M | 3 | 774 | 5.23E-51 | IPR023298 |
| SUPERFAMILY | SSF81653 | Calcium ATPase, transduction domain A | 63 | 120 | 3.53E-13 | IPR008250 |
| SUPERFAMILY | SSF56784 | HAD-like | 251 | 562 | 6.1E-38 | IPR036412 |
| Gene3D | G3DSA:6.10.140.890 | - | 826 | 878 | 4.8E-20 | - |
| Gene3D | G3DSA:3.40.1110.10 | - | 267 | 415 | 1.8E-222 | IPR023299 |
| Gene3D | G3DSA:3.40.50.1000 | - | 252 | 552 | 1.8E-222 | IPR023214 |
| Gene3D | G3DSA:2.70.150.10 | - | 68 | 140 | 1.0E-15 | - |
| Gene3D | G3DSA:1.20.1110.10 | - | 218 | 742 | 1.8E-222 | - |
| Gene3D | G3DSA:1.20.1110.10 | - | 11 | 67 | 8.2E-16 | - |
| TIGRFAM | TIGR01494 | ATPase_P-type: HAD ATPase, P-type, family IC | 490 | 604 | 2.2E-26 | IPR001757 |
| TIGRFAM | TIGR01647 | ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase | 218 | 733 | 4.2E-220 | IPR006534 |
| ProSitePatterns | PS00154 | E1-E2 ATPases phosphorylation site. | 257 | 263 | - | IPR018303 |
| PRINTS | PR00119 | P-type cation-transporting ATPase superfamily signature | 515 | 534 | 4.1E-37 | - |
| PRINTS | PR00119 | P-type cation-transporting ATPase superfamily signature | 110 | 124 | 4.1E-37 | - |
| PRINTS | PR00119 | P-type cation-transporting ATPase superfamily signature | 255 | 269 | 4.1E-37 | - |
| PRINTS | PR00119 | P-type cation-transporting ATPase superfamily signature | 432 | 442 | 4.1E-37 | - |
| PRINTS | PR00119 | P-type cation-transporting ATPase superfamily signature | 538 | 550 | 4.1E-37 | - |
| PRINTS | PR00119 | P-type cation-transporting ATPase superfamily signature | 410 | 421 | 4.1E-37 | - |
| PRINTS | PR00120 | H+-transporting ATPase (proton pump) signature | 487 | 503 | 9.5E-58 | IPR001757 |
| PRINTS | PR00120 | H+-transporting ATPase (proton pump) signature | 515 | 531 | 9.5E-58 | IPR001757 |
| PRINTS | PR00120 | H+-transporting ATPase (proton pump) signature | 372 | 390 | 9.5E-58 | IPR001757 |
| PRINTS | PR00120 | H+-transporting ATPase (proton pump) signature | 546 | 571 | 9.5E-58 | IPR001757 |
| PRINTS | PR00120 | H+-transporting ATPase (proton pump) signature | 687 | 708 | 9.5E-58 | IPR001757 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 217 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 193 | - | - |
| SFLD | SFLDF00027 | p-type atpase | 237 | 566 | 0.0 | IPR044492 |
| SFLD | SFLDS00003 | Haloacid Dehalogenase | 237 | 566 | 0.0 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57350.1 | H(+)-ATPase 3. member of Plasma membrane H+-ATPase family | 0 |
| RefSeq | XP_025794057.1 | plasma membrane ATPase-like [Panicum hallii] | 0 |
| Q7XPY2 | Plasma membrane ATPase OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0656100 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2S3IUN7 | Plasma membrane ATPase OS=Panicum hallii OX=206008 GN=PAHAL_9G619700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology