Basic Information
Locus ID:
AH01.5143
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 64076670 | 64080007 | + | AH01.5143 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.67 | 58,312.14 Da | 48.30 | 85.61 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 221 | 487 | 3.15893E-102 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 218 | 486 | 4.5E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 195 | 489 | 5.33E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 291 | 500 | 1.7E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 193 | 290 | 3.5E-32 | - |
| SMART | SM00220 | serkin_6 | 215 | 493 | 4.3E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 215 | 492 | 37.728607 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 221 | 243 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 337 | 349 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 162 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 500 | 524 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 109 | 193 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 182 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 3.24E-195 |
| RefSeq | XP_039825095.1 | probable serine/threonine-protein kinase At1g01540 [Panicum virgatum] | 1.77E-309 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 3.11E-194 | |
| TrEMBL | A0A3L6S898 | Putative serine/threonine-protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM02G39120 PE=4 SV=1 | 3.99E-308 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology