Basic Information
Locus ID:
AH01.5042
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 63385163 | 63390841 | + | AH01.5042 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 99,700.10 Da | 44.45 | 76.20 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 479 | 595 | 1.0E-9 | IPR001525 |
| Pfam | PF07876 | Stress responsive A/B Barrel Domain | 670 | 764 | 2.6E-10 | IPR013097 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 283 | 475 | 3.82E-24 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 478 | 593 | 9.63E-19 | IPR029063 |
| SUPERFAMILY | SSF54909 | Dimeric alpha+beta barrel | 785 | 885 | 8.45E-9 | IPR011008 |
| SUPERFAMILY | SSF54909 | Dimeric alpha+beta barrel | 669 | 773 | 2.5E-13 | IPR011008 |
| Gene3D | G3DSA:1.10.8.10 | - | 51 | 101 | 1.7E-7 | - |
| Gene3D | G3DSA:3.30.70.100 | - | 779 | 881 | 1.3E-5 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 281 | 367 | 2.0E-6 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 468 | 639 | 5.7E-28 | - |
| Gene3D | G3DSA:3.30.70.100 | - | 667 | 767 | 1.2E-11 | - |
| SMART | SM00165 | uba_6 | 60 | 98 | 4.3 | IPR015940 |
| SMART | SM00165 | uba_6 | 162 | 197 | 0.41 | IPR015940 |
| SMART | SM00886 | Dabb_2 | 670 | 765 | 2.5E-10 | IPR013097 |
| SMART | SM00886 | Dabb_2 | 785 | 880 | 0.036 | IPR013097 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 58 | 99 | 9.848019 | IPR015940 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 275 | 601 | 131.903 | IPR030380 |
| ProSiteProfiles | PS51502 | Stress-response A/B barrel domain profile. | 785 | 878 | 15.884148 | IPR013097 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 158 | 202 | 9.462465 | IPR015940 |
| ProSiteProfiles | PS51502 | Stress-response A/B barrel domain profile. | 670 | 763 | 20.043655 | IPR013097 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 154 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 3.35E-169 |
| RefSeq | XP_004986027.1 | DNA (cytosine-5)-methyltransferase DRM2 [Setaria italica] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 2.23E-286 | |
| TrEMBL | B8ALG0 | SAM-dependent MTase DRM-type domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_09692 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology