Basic Information
Locus ID:
AH01.4939
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 62473695 | 62487806 | - | AH01.4939 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.29 | 155,331.16 Da | 50.06 | 86.85 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00165 | S4 | 169 | 236 | 3.92045E-10 | IPR002942 |
| CDD | cd00106 | KISc | 528 | 868 | 1.68249E-118 | - |
| CDD | cd02870 | PseudoU_synth_RsuA_like | 232 | 389 | 5.41947E-42 | - |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 1200 | 1237 | 1.2E-5 | IPR000225 |
| Pfam | PF00225 | Kinesin motor domain | 534 | 870 | 6.1E-95 | IPR001752 |
| Pfam | PF01479 | S4 domain | 169 | 210 | 3.5E-12 | IPR002942 |
| Pfam | PF00849 | RNA pseudouridylate synthase | 232 | 374 | 2.9E-16 | IPR006145 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 528 | 908 | 2.82E-100 | IPR027417 |
| SUPERFAMILY | SSF48371 | ARM repeat | 1149 | 1408 | 1.19E-32 | IPR016024 |
| SUPERFAMILY | SSF55120 | Pseudouridine synthase | 230 | 398 | 9.12E-30 | IPR020103 |
| SUPERFAMILY | SSF55174 | Alpha-L RNA-binding motif | 160 | 253 | 5.5E-17 | - |
| Gene3D | G3DSA:3.30.70.580 | - | 232 | 399 | 3.6E-43 | IPR020094 |
| Gene3D | G3DSA:1.25.10.10 | - | 1144 | 1329 | 5.8E-29 | IPR011989 |
| Gene3D | G3DSA:3.30.70.1560 | - | 308 | 393 | 3.6E-43 | IPR042092 |
| Gene3D | G3DSA:1.25.10.10 | - | 1330 | 1415 | 4.6E-6 | IPR011989 |
| Gene3D | G3DSA:3.10.290.10 | - | 164 | 226 | 3.6E-18 | IPR036986 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 521 | 901 | 1.0E-111 | IPR036961 |
| SMART | SM00185 | arm_5 | 1156 | 1196 | 300.0 | IPR000225 |
| SMART | SM00363 | s4_6 | 169 | 228 | 2.7E-13 | IPR002942 |
| SMART | SM00185 | arm_5 | 1239 | 1280 | 96.0 | IPR000225 |
| SMART | SM00129 | kinesin_4 | 526 | 878 | 3.8E-112 | IPR001752 |
| SMART | SM00185 | arm_5 | 1281 | 1321 | 10.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 1197 | 1238 | 0.036 | IPR000225 |
| ProSiteProfiles | PS50889 | S4 RNA-binding domain profile. | 169 | 238 | 14.65749 | - |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 1208 | 1251 | 13.0724 | IPR000225 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 528 | 870 | 105.857765 | IPR001752 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 1167 | 1209 | 11.3574 | IPR000225 |
| ProSitePatterns | PS01149 | Rsu family of pseudouridine synthase signature. | 279 | 293 | - | IPR018496 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 770 | 781 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 604 | 625 | 5.7E-27 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 820 | 841 | 5.7E-27 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 771 | 789 | 5.7E-27 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 445 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 528 | - | - |
| Coils | Coil | Coil | 103 | 123 | - | - |
| Coils | Coil | Coil | 996 | 1016 | - | - |
| Coils | Coil | Coil | 1042 | 1115 | - | - |
| Coils | Coil | Coil | 929 | 992 | - | - |
| Coils | Coil | Coil | 879 | 913 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54870.2 | - | 6.08E-242 |
| RefSeq | XP_022678578.1 | kinesin-like protein KIN-UA isoform X2 [Setaria italica] | 0 |
| Q0DV28 | Kinesin-like protein KIN-UA OS=Oryza sativa subsp. japonica OX=39947 GN=KINUA PE=2 SV=2 | 0 | |
| TrEMBL | A0A368SVP6 | Kinesin-like protein OS=Setaria italica OX=4555 GN=SETIT_9G536800v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg34362 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_18540 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah025441 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_4g079150, BVRB_6g142930 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg12892, Sbi_jg52978 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg8879 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017701 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl32899, Sgl38239 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000000106, gene:ENSEOMG00000000156 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0013090, CQ.Regalona.r1.6BG0013840 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30170710 |
| Apiaceae | Apium graveolens | 1 | Ag11G03754 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G010960 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103720767 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_10.1564.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri17G33780 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT2G39140.1, AT3G43340.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10016747m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g21490.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB06g005590.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G0563 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno14g04220 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0459s00006.v1.0, Dusal.0755s00004.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g06860 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.1085 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00035041 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G05292 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.4939, BH01.4875, BH01.5123 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0234110, gene-QOZ80_3BG0293890 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0400870.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_070677 |
| Poaceae | Oryza coarctata | 2 | Oco05G003210, Oco06G003230 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g05806.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G477400 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0103097, Pt_Chr0601943 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr04G003940, Chr04G004260, Chr07G007270 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G454900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG005060, gene_TRIDC4BG046640 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G036500.1, TraesCS4B02G269400.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb004240_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-2873 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g2047 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG03.1902, evm.TU.LG14.193 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g01220 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.1593 |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-26148, nbisL1-mrna-26150, nbisL1-mrna-26151 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7182 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-4414 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000008l.871 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00000227 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-2181 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9576 |
| Salicaceae | Populus euphratica | 2 | populus_peu06232, populus_peu20068 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132614208 |
| Solanaceae | Solanum chilense | 1 | SOLCI003201000 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107004655 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_13342 |
| Tamaricaceae | Tamarix chinensis | 1 | TC11G1552 |
| Zosteraceae | Zostera marina | 1 | Zosma03g16070.v3.1 |