Basic Information
Locus ID:
AH01.4544
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
DRM2
Description:
C-5 cytosine-specific DNA methylase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 59337675 | 59344840 | - | AH01.4544 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 101,260.89 Da | 47.90 | 82.86 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 470 | 585 | 5.3E-10 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 274 | 467 | 2.55E-20 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 470 | 585 | 2.65E-19 | IPR029063 |
| SUPERFAMILY | SSF46934 | UBA-like | 144 | 195 | 1.53E-5 | IPR009060 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 429 | 599 | 3.9E-28 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 264 | 353 | 3.1E-5 | - |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 164 | 206 | 9.1733 | IPR015940 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 267 | 593 | 129.388214 | IPR030380 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 646 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 241 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 251 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 3.77E-166 |
| RefSeq | XP_025798415.1 | DNA (cytosine-5)-methyltransferase DRM2-like isoform X1 [Panicum hallii] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 6.64E-239 | |
| TrEMBL | A0A3L6S798 | SAM-dependent MTase DRM-type domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM02G33450 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology