Basic Information
Locus ID:
AH01.4204
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 55718861 | 55721487 | + | AH01.4204 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 55,466.92 Da | 57.03 | 72.11 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 273 | 365 | 1.2E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 168 | 434 | 1.89E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 156 | 264 | 4.7E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 271 | 452 | 1.1E-46 | - |
| SMART | SM00220 | serkin_6 | 190 | 434 | 6.8E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 190 | 447 | 27.962011 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 196 | 218 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 280 | 292 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 498 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 35 | - | - |
| Coils | Coil | Coil | 209 | 229 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24550.1 | proline extensin-like receptor kinase 1. encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection. | 1.67E-103 |
| RefSeq | XP_025792110.1 | proline-rich receptor-like protein kinase PERK15 [Panicum hallii] | 3.45E-269 |
| Q9LV48 | Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1 | 1.62E-102 | |
| TrEMBL | A0A2S3IS11 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G517600 PE=4 SV=1 | 5.82E-269 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH01.4204, BH01.4522, CH01.202, CH01.4819 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0242550, gene-QOZ80_3BG0285630 |
| Poaceae | Oryza coarctata | 1 | Oco05G009310 |
| Poaceae | Oryza sativa | 3 | LOC_Os03g16260.1, LOC_Os03g38710.1, LOC_Os09g14580.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G404200 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g1549 |