Basic Information
Locus ID:
AH01.3671
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Phloem protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 50924842 | 50927194 | + | AH01.3671 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.79 | 35,456.53 Da | 48.80 | 64.19 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 160 | 220 | 1.5E-15 | IPR025886 |
| SUPERFAMILY | SSF81383 | F-box domain | 81 | 116 | 7.63E-6 | IPR036047 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 78 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02360.1 | phloem protein 2-B10. | 5.84E-23 |
| RefSeq | XP_025792086.1 | putative F-box protein PP2-B8 [Panicum hallii] | 1.27E-105 |
| Q9FLU7 | Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1 | 2.82E-23 | |
| TrEMBL | A0A2T7CCU6 | F-box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G480100 PE=4 SV=1 | 2.88E-104 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology