Basic Information
Locus ID:
AH01.3410
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 48289181 | 48290389 | + | AH01.3410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 42,372.97 Da | 51.48 | 70.22 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 83 | 137 | 5.46129E-8 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 77 | 141 | 8.5E-8 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 72 | 155 | 2.2E-7 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 82 | 140 | 0.0021 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 83 | 140 | 9.479224 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01710.1 | Chaperone DnaJ-domain superfamily protein. | 1.03E-38 |
| RefSeq | XP_039785817.1 | SKI family transcriptional corepressor 1-like [Panicum virgatum] | 2.4E-242 |
| TrEMBL | A0A3L6TSD9 | J domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM01G17110 PE=4 SV=1 | 3.14E-247 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology