Basic Information
Locus ID:
AH01.3388
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Zinc finger MYM-type protein 1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 47982370 | 47990002 | - | AH01.3388 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.65 | 98,090.46 Da | 64.53 | 70.11 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14291 | Domain of unknown function (DUF4371) | 525 | 575 | 2.8E-10 | IPR025398 |
| SUPERFAMILY | SSF48484 | Lipoxigenase | 3 | 67 | 7.46E-7 | IPR036226 |
| SMART | SM00597 | 2118neu4 | 441 | 541 | 2.7E-18 | IPR006580 |
| ProSiteProfiles | PS51393 | Lipoxygenase iron-binding catalytic domain profile. | 1 | 94 | 9.197106 | IPR013819 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 653 | 701 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 790 | 805 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 863 | 882 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 659 | 677 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 755 | 808 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G09660.1 | 8.15E-45 | |
| RefSeq | XP_008653066.1 | zinc finger MYM-type protein 1-like [Zea mays] | 4.2E-82 |
| A8QW53 | 5-pentadecatrienyl resorcinol O-methyltransferase OS=Sorghum bicolor OX=4558 GN=OMT3 PE=1 SV=1 | 1.16E-6 | |
| TrEMBL | Q01N04 | OSIGBa0126J24.6 protein OS=Oryza sativa OX=4530 GN=OSIGBa0126J24.6 PE=4 SV=1 | 8.17E-86 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||