Basic Information
Locus ID:
AH01.3253
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 46458492 | 46464713 | - | AH01.3253 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.08 | 52,034.25 Da | 62.94 | 56.44 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 380 | 436 | 3.4E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 211 | 267 | 2.2E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 371 | 439 | 2.48E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 209 | 269 | 5.1E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 195 | 270 | 1.5E-27 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 364 | 440 | 4.0E-35 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 379 | 438 | 1.0E-38 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 210 | 268 | 1.1E-33 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 374 | 439 | 37.171917 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 211 | 269 | 23.789268 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 348 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 303 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 278 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 1.35E-101 |
| RefSeq | XP_039829141.1 | probable WRKY transcription factor 4 isoform X1 [Panicum virgatum] | 3.63E-290 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 1.3E-100 | |
| TrEMBL | A0A8T0MS54 | WRKY transcription factor 4 OS=Panicum virgatum OX=38727 GN=PVAP13_9NG515600 PE=4 SV=1 | 8.2E-289 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology