Basic Information
Locus ID:
AH01.309
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 2587050 | 2590418 | + | AH01.309 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.21 | 59,709.34 Da | 42.31 | 78.12 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 57 | 315 | 8.66362E-140 | - |
| CDD | cd15898 | EFh_PI-PLC | 364 | 496 | 1.85159E-19 | - |
| Pfam | PF13499 | EF-hand domain pair | 434 | 497 | 4.7E-14 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 376 | 425 | 1.7E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 58 | 316 | 1.0E-73 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 340 | 509 | 1.2E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 57 | 324 | 1.35E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 61 | 143 | 1.6E-28 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 325 | 499 | 1.2E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 144 | 324 | 6.3E-59 | - |
| SMART | SM00054 | efh_1 | 435 | 463 | 8.0E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 471 | 499 | 1.1E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 58 | 316 | 1.5E-99 | IPR000719 |
| SMART | SM00054 | efh_1 | 363 | 391 | 1.7E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 399 | 427 | 1.1 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 58 | 316 | 49.290218 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 431 | 466 | 13.369694 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 395 | 430 | 8.962221 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 359 | 394 | 16.66135 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 467 | 502 | 13.871811 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 64 | 87 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 444 | 456 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 480 | 492 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 408 | 420 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 372 | 384 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 178 | 190 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| Coils | Coil | Coil | 450 | 470 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 6.9E-267 |
| RefSeq | XP_004981335.1 | calcium-dependent protein kinase 8 [Setaria italica] | 0 |
| Q75GE8 | Calcium-dependent protein kinase 8 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK8 PE=2 SV=1 | 4.46E-298 | |
| TrEMBL | A0A1E5W756 | Calcium-dependent protein kinase 8 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0005925 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology