Basic Information
Locus ID:
AH01.3003
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 43529633 | 43536089 | + | AH01.3003 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 176,559.20 Da | 39.74 | 85.12 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 1535 | 1575 | 2.26126E-20 | - |
| CDD | cd01853 | Toc34_like | 347 | 588 | 2.52531E-123 | - |
| Pfam | PF04564 | U-box domain | 1531 | 1598 | 2.7E-13 | IPR003613 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 728 | 984 | 1.7E-117 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 371 | 507 | 3.2E-30 | IPR006703 |
| Pfam | PF00069 | Protein kinase domain | 1245 | 1467 | 5.4E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1224 | 1498 | 1.12E-65 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 365 | 568 | 1.47E-17 | IPR027417 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1528 | 1599 | 2.83E-20 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1217 | 1316 | 1.4E-26 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 336 | 590 | 2.7E-57 | IPR027417 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1317 | 1518 | 5.1E-43 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1529 | 1600 | 2.0E-24 | IPR013083 |
| SMART | SM00220 | serkin_6 | 1243 | 1565 | 3.9E-29 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 1534 | 1596 | 8.3E-17 | IPR003613 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 248 | 989 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 1530 | 1601 | 22.876747 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1243 | 1510 | 33.474274 | IPR000719 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 368 | 598 | 31.860157 | IPR006703 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1362 | 1374 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1249 | 1270 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 626 | 647 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 183 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 653 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 289 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 137 | - | - |
| Coils | Coil | Coil | 1105 | 1125 | - | - |
| Coils | Coil | Coil | 1035 | 1083 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_034572829.1 | translocase of chloroplast 120, chloroplastic-like [Setaria viridis] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6T3S1 | AIG1-type G domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G337200v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology