Basic Information
Locus ID:
AH01.2704
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 38904426 | 38907613 | + | AH01.2704 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.82 | 69,043.02 Da | 50.50 | 84.05 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 591 | 635 | 9.8E-8 | IPR021820 |
| Pfam | PF01657 | Salt stress response/antifungal | 163 | 245 | 1.2E-9 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 25 | 123 | 5.0E-17 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 358 | 560 | 1.3E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 342 | 619 | 1.48E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 141 | 248 | 1.7E-19 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 320 | 432 | 2.4E-36 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 17 | 126 | 1.7E-23 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 433 | 604 | 2.2E-47 | - |
| SMART | SM00220 | serkin_6 | 357 | 596 | 7.2E-33 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 19 | 126 | 19.928648 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 140 | 248 | 17.330696 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 357 | 635 | 37.007771 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 478 | 490 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23230.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 15. Encodes a cysteine-rich receptor-like protein kinase. | 8.79E-124 |
| RefSeq | XP_034574436.1 | cysteine-rich receptor-like protein kinase 10 [Setaria viridis] | 0 |
| Q0D5R2 | Cysteine-rich receptor-like protein kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK10 PE=2 SV=1 | 1.67E-134 | |
| TrEMBL | A0A4U6T213 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G306000v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology