halophFGD

Basic Information

Locus ID: AH01.2656

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: A Receptor for Ubiquitination Targets

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
AH01	38042531	38044638	+	AH01.2656

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.30	39,976.95 Da	51.62	89.61	-0.07

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12937	F-box-like	18	56	5.3E-10	IPR001810
SUPERFAMILY	SSF81383	F-box domain	10	119	1.57E-16	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	13	58	6.7E-10	-
SMART	SM00256	fbox_2	17	59	2.3E-5	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_004983399.1	uncharacterized protein LOC101773088 [Setaria italica]	5.74E-144
TrEMBL	A0A3L6TJ63	F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM01G46380 PE=4 SV=1	1.93E-164

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	2	AH01.2656, BH01.3005
Poaceae	Paspalum vaginatum	1	gene-BS78_01G262000