Basic Information
Locus ID:
AH01.2619
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein of unknown function (DUF 659)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 37126684 | 37132098 | - | AH01.2619 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 134,047.30 Da | 60.65 | 65.60 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 761 | 862 | 3.73E-7 | IPR038765 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 965 | 1171 | 7.21E-17 | IPR012337 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 577 | 624 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 557 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 655 | 684 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 628 | - | - |
| Coils | Coil | Coil | 283 | 317 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039827323.1 | uncharacterized protein LOC120689042 [Panicum virgatum] | 1.18E-113 |
| TrEMBL | B8BAR1 | ULP_PROTEASE domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29206 PE=3 SV=1 | 1.21E-140 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 46 | AH01.2619, AH01.3243, AH02.2591, AH02.744, AH03.1151 ... |
| Poaceae | Lolium multiflorum | 13 | gene-QYE76_005385, gene-QYE76_005912, gene-QYE76_006405 ... |